miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|148312921|gb|ES572814.1|ES572814 TAGTTACGGGGAACGCTTCCTCCGACAAATGAGAATTCACCACGTTTAGCGATAACGGCCCGGCTACCAAAGATCTATCT
AGAAACTTGGATACTTGTCGGAAGAATTATTATTTATTAATACTAACGCATATTTCTTTTACATTTGAGAGCAATATAAA
CAAGATCACCGAGAATGAAGATCTGGTCTTCTATAATTCTGATGGCTGCCCTTTTGCTAATGACATCACTGGCAGCTGAC
TTTGAAGAAGAGGACGATGCTGAGGATGGGATAGTAGAGGTTGAAGATGAAGTTGTTTTTGAAAAAGAAAGGCCTGTTTA
TGAAAGACCTGTACCAAGTGGTGCAACATATTTTCTCGAGCCATTTGATACAAGGGCTGAATTTTTAAAGAGATGGGTTC
AATCACAAGCCAAAAAAAGATGGCGCTGAAGATCATCTTGCTAAGTATGATGGTAAATGGGCTGTTGAAGAAGCAAGAGA
AAATCCAATAATCAGAGATTTGGGCCTTATTCTTAAGACCAAGGCAAAGCATCATGCTATCGCAGCAAAGCTGGATAAAC
CTTTTGATTTTAATGGGAAACCATTGATTGTTCAGTATGAAGTTAAATTTCAAAATGGCATAGACTGTGGTGGTGCATAC
ATCAAACTGCTCTCAAAAGGGGAACAGCCGCTCAATCTGAAAGCATTCACTGATAAGACACCCTATACTATTATGTTTGG
ACCTGACAAATGTGGCAATGATCATAAGCTCCATTTTATATTCCGTCACAAGAACCCCAAAACTGGACAATATGAGGAAA
AGCATGCTGA




Most similar to sp|P27824|CALX_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P27824|CALX_HUMAN Calnexin OS=Homo sapiens GN=CANX PE=1 SV=2
          Length = 592

 Score =  177 bits (450), Expect(2) = 3e-47
 Identities = 87/134 (64%), Positives = 98/134 (73%)
 Frame = +2

Query: 407 KPKKDGAEDHLAKYDGKWAVEEARENPIIRDLGLXXXXXXXXXXXXXXXDKPFDFNGKPL 586
           K KKD  +D +AKYDGKW VEE +E+ +  D GL               +KPF F+ KPL
Sbjct: 87  KAKKDDTDDEIAKYDGKWEVEEMKESKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPL 146

Query: 587 IVQYEVKFQNGIDCGGAYIKLLSKGEQPLNLKAFTDKTPYTIMFGPDKCGNDHKLHFIFR 766
           IVQYEV FQNGI+CGGAY+KLLSK  + LNL  F DKTPYTIMFGPDKCG D+KLHFIFR
Sbjct: 147 IVQYEVNFQNGIECGGAYVKLLSKTPE-LNLDQFHDKTPYTIMFGPDKCGEDYKLHFIFR 205

Query: 767 HKNPKTGQYEEKHA 808
           HKNPKTG YEEKHA
Sbjct: 206 HKNPKTGIYEEKHA 219



 Score = 32.7 bits (73), Expect(2) = 3e-47
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +1

Query: 319 YERPVPSGATYFLEPFDTRAEFLKRWVQSQAKK 417
           Y+ PVP+G  YF + FD     L  W+ S+AKK
Sbjct: 60  YKAPVPTGEVYFADSFDRGT--LSGWILSKAKK 90


          Length = 591

 Score =  177 bits (448), Expect(2) = 3e-47
 Identities = 86/134 (64%), Positives = 97/134 (72%)
 Frame = +2

Query: 407 KPKKDGAEDHLAKYDGKWAVEEARENPIIRDLGLXXXXXXXXXXXXXXXDKPFDFNGKPL 586
           K KKD  +D +AKYDGKW V+E +E  +  D GL               +KPF F+ KPL
Sbjct: 88  KAKKDDTDDEIAKYDGKWEVDEMKETKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPL 147

Query: 587 IVQYEVKFQNGIDCGGAYIKLLSKGEQPLNLKAFTDKTPYTIMFGPDKCGNDHKLHFIFR 766
           IVQYEV FQNGI+CGGAY+KLLSK  + LNL  F DKTPYTIMFGPDKCG D+KLHFIFR
Sbjct: 148 IVQYEVNFQNGIECGGAYVKLLSKTSE-LNLDQFHDKTPYTIMFGPDKCGEDYKLHFIFR 206

Query: 767 HKNPKTGQYEEKHA 808
           HKNPKTG YEEKHA
Sbjct: 207 HKNPKTGVYEEKHA 220



 Score = 33.1 bits (74), Expect(2) = 3e-47
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +1

Query: 319 YERPVPSGATYFLEPFDTRAEFLKRWVQSQAKK 417
           Y+ PVP+G  YF + FD  +  L  W+ S+AKK
Sbjct: 61  YKAPVPTGEVYFADSFDRGS--LSGWILSKAKK 91


>sp|P24643|CALX_CANFA Calnexin OS=Canis familiaris GN=CANX PE=1 SV=3
          Length = 593

 Score =  176 bits (447), Expect(2) = 6e-47
 Identities = 86/134 (64%), Positives = 97/134 (72%)
 Frame = +2

Query: 407 KPKKDGAEDHLAKYDGKWAVEEARENPIIRDLGLXXXXXXXXXXXXXXXDKPFDFNGKPL 586
           K KKD  +D +AKYDGKW V+E +E  +  D GL               +KPF F+ KPL
Sbjct: 88  KAKKDDTDDEIAKYDGKWEVDEMKETKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPL 147

Query: 587 IVQYEVKFQNGIDCGGAYIKLLSKGEQPLNLKAFTDKTPYTIMFGPDKCGNDHKLHFIFR 766
           IVQYEV FQNGI+CGGAY+KLLSK  + LNL  F DKTPYTIMFGPDKCG D+KLHFIFR
Sbjct: 148 IVQYEVNFQNGIECGGAYVKLLSKTPE-LNLDQFHDKTPYTIMFGPDKCGEDYKLHFIFR 206

Query: 767 HKNPKTGQYEEKHA 808
           HKNPKTG YEEKHA
Sbjct: 207 HKNPKTGVYEEKHA 220



 Score = 32.7 bits (73), Expect(2) = 6e-47
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +1

Query: 319 YERPVPSGATYFLEPFDTRAEFLKRWVQSQAKK 417
           Y+ PVP+G  YF + FD     L  W+ S+AKK
Sbjct: 61  YKAPVPTGEVYFADSFDRGT--LSGWILSKAKK 91


>sp|Q5R440|CALX_PONAB Calnexin OS=Pongo abelii GN=CANX PE=2 SV=2
          Length = 592

 Score =  176 bits (447), Expect(2) = 6e-47
 Identities = 86/134 (64%), Positives = 98/134 (73%)
 Frame = +2

Query: 407 KPKKDGAEDHLAKYDGKWAVEEARENPIIRDLGLXXXXXXXXXXXXXXXDKPFDFNGKPL 586
           K KKD  +D +AKYDGKW V+E +E+ +  D GL               +KPF F+ KPL
Sbjct: 87  KAKKDDTDDEIAKYDGKWEVDEMKESKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPL 146

Query: 587 IVQYEVKFQNGIDCGGAYIKLLSKGEQPLNLKAFTDKTPYTIMFGPDKCGNDHKLHFIFR 766
           IVQYEV FQNGI+CGGAY+KLLSK  + LNL  F DKTPYTIMFGPDKCG D+KLHFIFR
Sbjct: 147 IVQYEVNFQNGIECGGAYVKLLSKTPE-LNLDQFHDKTPYTIMFGPDKCGEDYKLHFIFR 205

Query: 767 HKNPKTGQYEEKHA 808
           HKNPKTG YEEKHA
Sbjct: 206 HKNPKTGIYEEKHA 219



 Score = 32.7 bits (73), Expect(2) = 6e-47
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +1

Query: 319 YERPVPSGATYFLEPFDTRAEFLKRWVQSQAKK 417
           Y+ PVP+G  YF + FD     L  W+ S+AKK
Sbjct: 60  YKAPVPTGEVYFADSFDRGT--LSGWILSKAKK 90


>sp|P35564|CALX_MOUSE Calnexin OS=Mus musculus GN=Canx PE=1 SV=1
          Length = 591

 Score =  174 bits (442), Expect(2) = 2e-46
 Identities = 85/134 (63%), Positives = 97/134 (72%)
 Frame = +2

Query: 407 KPKKDGAEDHLAKYDGKWAVEEARENPIIRDLGLXXXXXXXXXXXXXXXDKPFDFNGKPL 586
           K KKD  +D +AKYDGKW V+E +E  +  D GL               +KPF F+ KPL
Sbjct: 88  KAKKDDTDDEIAKYDGKWEVDEMKETKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPL 147

Query: 587 IVQYEVKFQNGIDCGGAYIKLLSKGEQPLNLKAFTDKTPYTIMFGPDKCGNDHKLHFIFR 766
           IVQYEV FQNGI+CGGAY+KLLSK  + L+L  F DKTPYTIMFGPDKCG D+KLHFIFR
Sbjct: 148 IVQYEVNFQNGIECGGAYVKLLSKTAE-LSLDQFHDKTPYTIMFGPDKCGEDYKLHFIFR 206

Query: 767 HKNPKTGQYEEKHA 808
           HKNPKTG YEEKHA
Sbjct: 207 HKNPKTGVYEEKHA 220



 Score = 33.1 bits (74), Expect(2) = 2e-46
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +1

Query: 319 YERPVPSGATYFLEPFDTRAEFLKRWVQSQAKK 417
           Y+ PVP+G  YF + FD  +  L  W+ S+AKK
Sbjct: 61  YKAPVPTGEVYFADSFDRGS--LSGWILSKAKK 91


          Length = 606

 Score =  159 bits (402), Expect(2) = 3e-41
 Identities = 79/134 (58%), Positives = 93/134 (69%)
 Frame = +2

Query: 407 KPKKDGAEDHLAKYDGKWAVEEARENPIIRDLGLXXXXXXXXXXXXXXXDKPFDFNGKPL 586
           K KKD  +  ++ YDG+W +EE +EN I  D GL                KPF F  KPL
Sbjct: 74  KAKKDDIDAEISIYDGRWEIEELKENRIPGDRGLVLKSRAKHHAISAVLAKPFIFADKPL 133

Query: 587 IVQYEVKFQNGIDCGGAYIKLLSKGEQPLNLKAFTDKTPYTIMFGPDKCGNDHKLHFIFR 766
           +VQYEV FQ+GIDCGGAYIKLL+  +  LNL+ F DKT YTIMFGPDKCG D+KLHFIFR
Sbjct: 134 VVQYEVNFQDGIDCGGAYIKLLADTDG-LNLENFYDKTSYTIMFGPDKCGEDYKLHFIFR 192

Query: 767 HKNPKTGQYEEKHA 808
           HK+PKTG +EEKHA
Sbjct: 193 HKHPKTGVFEEKHA 206



 Score = 30.8 bits (68), Expect(2) = 3e-41
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +1

Query: 319 YERPVPSGATYFLEPFDTRAEFLKRWVQSQAKK 417
           Y+ P P G  YF E FD+    L  WV S+AKK
Sbjct: 47  YKTPQPVGEVYFTETFDSGR--LAGWVLSKAKK 77


          Length = 611

 Score =  156 bits (395), Expect(2) = 3e-40
 Identities = 78/134 (58%), Positives = 91/134 (67%)
 Frame = +2

Query: 407 KPKKDGAEDHLAKYDGKWAVEEARENPIIRDLGLXXXXXXXXXXXXXXXDKPFDFNGKPL 586
           K KKD  +  +A YDG+W +EE +EN +  D GL               +KPF F  KPL
Sbjct: 78  KAKKDDMDSEIAIYDGRWEIEELKENQVPGDRGLVLKSKAKHHAIAAVLEKPFIFADKPL 137

Query: 587 IVQYEVKFQNGIDCGGAYIKLLSKGEQPLNLKAFTDKTPYTIMFGPDKCGNDHKLHFIFR 766
           IVQYEV FQ+GIDCGGAYIKLL+     L L+ F DKT YTIMFGPDKCG D+KLH IFR
Sbjct: 138 IVQYEVNFQDGIDCGGAYIKLLA-DTGDLILENFYDKTSYTIMFGPDKCGEDYKLHLIFR 196

Query: 767 HKNPKTGQYEEKHA 808
           HK+PKTG +EEKHA
Sbjct: 197 HKHPKTGVFEEKHA 210



 Score = 30.4 bits (67), Expect(2) = 3e-40
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +1

Query: 319 YERPVPSGATYFLEPFDTRAEFLKRWVQSQAKK 417
           Y+ P P G  YF E FD+    L  WV S+AKK
Sbjct: 51  YKTPQPIGEVYFTETFDSGN--LAGWVLSKAKK 81


          Length = 610

 Score =  156 bits (394), Expect(2) = 3e-40
 Identities = 77/134 (57%), Positives = 92/134 (68%)
 Frame = +2

Query: 407 KPKKDGAEDHLAKYDGKWAVEEARENPIIRDLGLXXXXXXXXXXXXXXXDKPFDFNGKPL 586
           K KKD  ++ ++ YDG+W +EE +EN +  D GL                KPF F  KPL
Sbjct: 78  KAKKDDMDEEISIYDGRWEIEELKENQVPGDRGLVLKSRAKHHAISAVLAKPFIFADKPL 137

Query: 587 IVQYEVKFQNGIDCGGAYIKLLSKGEQPLNLKAFTDKTPYTIMFGPDKCGNDHKLHFIFR 766
           IVQYEV FQ+GIDCGGAYIKLL+  +  L L+ F DKT Y IMFGPDKCG D+KLHFIFR
Sbjct: 138 IVQYEVNFQDGIDCGGAYIKLLADTDD-LILENFYDKTSYIIMFGPDKCGEDYKLHFIFR 196

Query: 767 HKNPKTGQYEEKHA 808
           HK+PKTG +EEKHA
Sbjct: 197 HKHPKTGVFEEKHA 210



 Score = 30.8 bits (68), Expect(2) = 3e-40
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +1

Query: 319 YERPVPSGATYFLEPFDTRAEFLKRWVQSQAKK 417
           Y+ P P G  YF E FD+    L  WV S+AKK
Sbjct: 51  YKTPQPIGEVYFAETFDSGR--LAGWVLSKAKK 81


>sp|Q6Q487|CALX_ASPFU Calnexin homolog OS=Neosartorya fumigata
           (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
           GN=AFUA_4G12850 PE=2 SV=2
          Length = 563

 Score =  130 bits (328), Expect = 8e-30
 Identities = 67/136 (49%), Positives = 86/136 (63%), Gaps = 1/136 (0%)
 Frame = +2

Query: 401 NHKPKKDGAEDHLAKYDGKWAVEEARE-NPIIRDLGLXXXXXXXXXXXXXXXDKPFDFNG 577
           +H  K+D   +    Y G+WAVEE    N ++ D GL                K  D  G
Sbjct: 65  SHAKKEDSKSEEDWAYVGEWAVEEPTVLNGMVGDKGLVVKNVAAHHAISAKFPKKIDNKG 124

Query: 578 KPLIVQYEVKFQNGIDCGGAYIKLLSKGEQPLNLKAFTDKTPYTIMFGPDKCGNDHKLHF 757
           K L+VQYEVK QN + CGGAY+KLL + ++ L+ + F++ TPY IMFGPDKCG  +K+HF
Sbjct: 125 KTLVVQYEVKPQNSLVCGGAYMKLLQENKK-LHAEEFSNATPYVIMFGPDKCGATNKVHF 183

Query: 758 IFRHKNPKTGQYEEKH 805
           IFRHKNPKTG+YEEKH
Sbjct: 184 IFRHKNPKTGEYEEKH 199